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pkgsrc の package に対して patch を作成する方法を簡単にまとめておくで ござる。
ここでは、 pkgsrc_myownpkgs/py-astro-aleph というパッケージに対してパッ チを作成することを考えるでござる。まず、 make してみるでござる。
# cd /usr/pkgsrc/pkgsrc_myownpkgs/py-astro-aleph # make => Bootstrap dependency digest>=20211023: found digest-20220214 => Checksum BLAKE2s OK for astro_aleph-1.0.0.tar.gz => Checksum SHA512 OK for astro_aleph-1.0.0.tar.gz ===> Installing dependencies for py312-astro_aleph-1.0.0 ========================================================================== The following variables will affect the build process of this package, py312-astro_aleph-1.0.0. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp * PYTHON_VERSION_DEFAULT = 312 Based on these variables, the following variables have been set: * BLAS_INCLUDES = -I/usr/pkg/include/netlib * BLAS_LIBS = -lblas * BLAS_PC = blas * BLAS_TYPE = netlib * CBLAS_LIBS = -lcblas -lblas * CBLAS_PC = cblas * LAPACKE_LIBS = -llapacke -llapack -lblas * LAPACKE_PC = lapacke * LAPACK_LIBS = -llapack -lblas * LAPACK_PC = lapack * PYPACKAGE = python312 You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency py312-build>=0: found py312-build-1.0.3nb1 => Tool dependency py312-installer>=0.7.0nb1: found py312-installer-0.7.0nb1 => Tool dependency mktools-[0-9]*: found mktools-20220614 => Tool dependency cwrappers>=20150314: found cwrappers-20220403 => Full dependency py312-pandas>=1.1.3: found py312-pandas-2.1.4 => Full dependency py312-astropy>=4.2: found py312-astropy-6.0.1 => Full dependency py312-jplephem>=0: found py312-jplephem-2.21 => Full dependency py312-rebound>=3.12.2: found py312-rebound-4.3.2 => Full dependency py312-numpy>=1.20.3nb1: found py312-numpy-1.26.3 ===> Checking for vulnerabilities in py312-astro_aleph-1.0.0 ===> Overriding tools for py312-astro_aleph-1.0.0 ===> Extracting for py312-astro_aleph-1.0.0 ===> Patching for py312-astro_aleph-1.0.0 ===> Creating toolchain wrappers for py312-astro_aleph-1.0.0 ===> Configuring for py312-astro_aleph-1.0.0 ===> Building for py312-astro_aleph-1.0.0 * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib.netbsd-10.0_RC3-amd64-cpython-312 creating build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/AstEph.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/DataBase.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/Query.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/__init__.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/aleph_utils.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/alep copying aleph/pycutils.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/cutils.h -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph running build_ext building 'cutils' extension creating build/temp.netbsd-10.0_RC3-amd64-cpython-312 creating build/temp.netbsd-10.0_RC3-amd64-cpython-312/aleph gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -O2 -I/usr/include -I/usr/pkg/ikg/include/python3.12 -c aleph/cutils.c -o build/temp.netbsd-10.0_RC3-amd64-cpyt gcc -shared -Wl,-zrelro -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/g/include -I/usr/include -I/usr/pkg/include/python3.12 -I/usr/pkg/include -I/usr installing to build/bdist.netbsd-10.0_RC3-amd64/wheel running install running install_lib creating build/bdist.netbsd-10.0_RC3-amd64 creating build/bdist.netbsd-10.0_RC3-amd64/wheel creating build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/AstEph.py -> build/bdi copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/DataBase.py -> build/b copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/Query.py -> build/bdis copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/__init__.py -> build/b copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/aleph_utils.py -> buil copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/pycutils.py -> build/b copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/cutils.h -> build/bdis copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/cutils.so -> build/bdist.net running install_egg_info running egg_info writing astro_aleph.egg-info/PKG-INFO writing dependency_links to astro_aleph.egg-info/dependency_links.txt writing requirements to astro_aleph.egg-info/requires.txt writing top-level names to astro_aleph.egg-info/top_level.txt reading manifest file 'astro_aleph.egg-info/SOURCES.txt' writing manifest file 'astro_aleph.egg-info/SOURCES.txt' Copying astro_aleph.egg-info to build/bdist.netbsd-10.0_RC3-amd64/wheel/astro_al running install_scripts creating build/bdist.netbsd-10.0_RC3-amd64/wheel/astro_aleph-1.0.0.dist-info/WHE creating '/usr/pkgsrc.2023Q4/pkgsrc_myownpkgs/py-astro-aleph/work/astro_aleph-1. adding 'cutils.so' adding 'aleph/AstEph.py' adding 'aleph/DataBase.py' adding 'aleph/Query.py' adding 'aleph/__init__.py' adding 'aleph/aleph_utils.py' adding 'aleph/cutils.h' adding 'aleph/pycutils.py' adding 'astro_aleph-1.0.0.dist-info/METADATA' adding 'astro_aleph-1.0.0.dist-info/WHEEL' adding 'astro_aleph-1.0.0.dist-info/top_level.txt' adding 'astro_aleph-1.0.0.dist-info/RECORD' removing build/bdist.netbsd-10.0_RC3-amd64/wheel Successfully built astro_aleph-1.0.0-cp312-cp312-netbsd_10_0_rc3_amd64.whl
work/astro_aleph-1.0.0/aleph/AstEph.py と work/astro_aleph-1.0.0/aleph/Query.py の二つのファイルに修正を加えたい とするでござる。 pkgvi コマンドを使って、ファイルを修正すればよいでご ざる。
# pkgvi work/astro_aleph-1.0.0/aleph/AstEph.py pkgvi: File was modified. For a diff, type: pkgdiff "work/astro_aleph-1.0.0/aleph/AstEph.py" # pkgvi work/astro_aleph-1.0.0/aleph/Query.py pkgvi: File was modified. For a diff, type: pkgdiff "work/astro_aleph-1.0.0/aleph/Query.py"
ソースコードの修正が終わったら、次に mkpatches コマンドを実行して、パッ チファイルを作成するでござる。
# mkpatches
すると、 patches というディレクトリーができるでござる。
# ls -lF total 12 -rw-r--r-- 1 root wheel 278 Apr 16 22:24 DESCR -rw-r--r-- 1 root wheel 764 Apr 16 22:24 Makefile -rw-r--r-- 1 root wheel 789 Apr 16 22:24 PLIST -rw-r--r-- 1 root wheel 323 Apr 17 10:46 distinfo drwxr-xr-x 2 root wheel 512 Apr 17 10:50 patches/ drwxr-xr-x 15 root wheel 1024 Apr 17 10:47 work/ # ls -lF patches/ total 4 -rw-r--r-- 1 root wheel 866 Apr 17 10:50 patch-aleph_AstEph.py -rw-r--r-- 1 root wheel 0 Apr 17 10:50 patch-aleph_AstEph.py.orig -rw-r--r-- 1 root wheel 439 Apr 17 10:50 patch-aleph_Query.py -rw-r--r-- 1 root wheel 0 Apr 17 10:50 patch-aleph_Query.py.orig
更に、 make mps を実行して、パッチファイルについての情報を distinfo ファ イルの中に書き込むでござる。
# make mps
distinfo ファイルの内容が変更されているでござる。
# ls -ltF total 12 -rw-r--r-- 1 root wheel 466 Apr 17 10:53 distinfo drwxr-xr-x 2 root wheel 512 Apr 17 10:50 patches/ drwxr-xr-x 15 root wheel 1024 Apr 17 10:47 work/ -rw-r--r-- 1 root wheel 789 Apr 16 22:24 PLIST -rw-r--r-- 1 root wheel 764 Apr 16 22:24 Makefile -rw-r--r-- 1 root wheel 278 Apr 16 22:24 DESCR # cat distinfo $NetBSD$ BLAKE2s (astro_aleph-1.0.0.tar.gz) = 9b699995c47d57ec37013e08a76aa4485983944debbb6b2772d1df37d733a099 SHA512 (astro_aleph-1.0.0.tar.gz) = 60b1f96801b43e938da26e91711ee2e229e7789d17563b29eb5252b57236d32b4c43bdc37da183f31b92df085737c2058224806647995bcc0af0c7fe93197d86 Size (astro_aleph-1.0.0.tar.gz) = 29354 bytes SHA1 (patch-aleph_AstEph.py) = f0e21eadf5f80baa6d1c060bde949c50825ab204 SHA1 (patch-aleph_Query.py) = 54723aeea2c4aa2377afb8b5c8a01fbe3c5ccf54
この後、 make clean してから make install すれば、パッチが適用されたも のがインストールされるでござる。
# make clean ===> Cleaning for py312-astro_aleph-1.0.0 # make install => Bootstrap dependency digest>=20211023: found digest-20220214 => Checksum BLAKE2s OK for astro_aleph-1.0.0.tar.gz => Checksum SHA512 OK for astro_aleph-1.0.0.tar.gz ===> Installing dependencies for py312-astro_aleph-1.0.0 ========================================================================== The following variables will affect the build process of this package, py312-astro_aleph-1.0.0. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp * PYTHON_VERSION_DEFAULT = 312 Based on these variables, the following variables have been set: * BLAS_INCLUDES = -I/usr/pkg/include/netlib * BLAS_LIBS = -lblas * BLAS_PC = blas * BLAS_TYPE = netlib * CBLAS_LIBS = -lcblas -lblas * CBLAS_PC = cblas * LAPACKE_LIBS = -llapacke -llapack -lblas * LAPACKE_PC = lapacke * LAPACK_LIBS = -llapack -lblas * LAPACK_PC = lapack * PYPACKAGE = python312 You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency py312-build>=0: found py312-build-1.0.3nb1 => Tool dependency py312-installer>=0.7.0nb1: found py312-installer-0.7.0nb1 => Tool dependency mktools-[0-9]*: found mktools-20220614 => Tool dependency cwrappers>=20150314: found cwrappers-20220403 => Full dependency py312-pandas>=1.1.3: found py312-pandas-2.1.4 => Full dependency py312-astropy>=4.2: found py312-astropy-6.0.1 => Full dependency py312-jplephem>=0: found py312-jplephem-2.21 => Full dependency py312-rebound>=3.12.2: found py312-rebound-4.3.2 => Full dependency py312-numpy>=1.20.3nb1: found py312-numpy-1.26.3 ===> Checking for vulnerabilities in py312-astro_aleph-1.0.0 ===> Overriding tools for py312-astro_aleph-1.0.0 ===> Extracting for py312-astro_aleph-1.0.0 ===> Patching for py312-astro_aleph-1.0.0 => Applying pkgsrc patches for py312-astro_aleph-1.0.0 => Ignoring patchfile /usr/pkgsrc.2023Q4/pkgsrc_myownpkgs/py-astro-aleph/patches/patch-aleph_AstEph.py.orig => Ignoring patchfile /usr/pkgsrc.2023Q4/pkgsrc_myownpkgs/py-astro-aleph/patches/patch-aleph_Query.py.orig ===> Creating toolchain wrappers for py312-astro_aleph-1.0.0 ===> Configuring for py312-astro_aleph-1.0.0 ===> Building for py312-astro_aleph-1.0.0 * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib.netbsd-10.0_RC3-amd64-cpython-312 creating build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/AstEph.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/DataBase.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/Query.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/__init__.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/aleph_utils.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/pycutils.py -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph copying aleph/cutils.h -> build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph running build_ext building 'cutils' extension creating build/temp.netbsd-10.0_RC3-amd64-cpython-312 creating build/temp.netbsd-10.0_RC3-amd64-cpython-312/aleph gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -O2 -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -O2 -I/usr/include -I/usr/pkg/include -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/python3.12 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/python3.12 -fPIC -Ialeph -I/usr/pkg/include/python3.12 -c aleph/cutils.c -o build/temp.netbsd-10.0_RC3-amd64-cpython-312/aleph/cutils.o -O3 -Wno-unknown-pragmas -fPIC -shared gcc -shared -Wl,-zrelro -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -Wl,-zrelro -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/python3.12 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/python3.12 build/temp.netbsd-10.0_RC3-amd64-cpython-312/aleph/cutils.o -L/usr/pkg/lib -o build/lib.netbsd-10.0_RC3-amd64-cpython-312/cutils.so installing to build/bdist.netbsd-10.0_RC3-amd64/wheel running install running install_lib creating build/bdist.netbsd-10.0_RC3-amd64 creating build/bdist.netbsd-10.0_RC3-amd64/wheel creating build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/AstEph.py -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/DataBase.py -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/Query.py -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/__init__.py -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/aleph_utils.py -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/pycutils.py -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/aleph/cutils.h -> build/bdist.netbsd-10.0_RC3-amd64/wheel/aleph copying build/lib.netbsd-10.0_RC3-amd64-cpython-312/cutils.so -> build/bdist.netbsd-10.0_RC3-amd64/wheel running install_egg_info running egg_info writing astro_aleph.egg-info/PKG-INFO writing dependency_links to astro_aleph.egg-info/dependency_links.txt writing requirements to astro_aleph.egg-info/requires.txt writing top-level names to astro_aleph.egg-info/top_level.txt reading manifest file 'astro_aleph.egg-info/SOURCES.txt' writing manifest file 'astro_aleph.egg-info/SOURCES.txt' Copying astro_aleph.egg-info to build/bdist.netbsd-10.0_RC3-amd64/wheel/astro_aleph-1.0.0-py3.12.egg-info running install_scripts creating build/bdist.netbsd-10.0_RC3-amd64/wheel/astro_aleph-1.0.0.dist-info/WHEEL creating '/usr/pkgsrc.2023Q4/pkgsrc_myownpkgs/py-astro-aleph/work/astro_aleph-1.0.0/dist/.tmp-ajxfgmi0/astro_aleph-1.0.0-cp312-cp312-netbsd_10_0_rc3_amd64.whl' and adding 'build/bdist.netbsd-10.0_RC3-amd64/wheel' to it adding 'cutils.so' adding 'aleph/AstEph.py' adding 'aleph/DataBase.py' adding 'aleph/Query.py' adding 'aleph/__init__.py' adding 'aleph/aleph_utils.py' adding 'aleph/cutils.h' adding 'aleph/pycutils.py' adding 'astro_aleph-1.0.0.dist-info/METADATA' adding 'astro_aleph-1.0.0.dist-info/WHEEL' adding 'astro_aleph-1.0.0.dist-info/top_level.txt' adding 'astro_aleph-1.0.0.dist-info/RECORD' removing build/bdist.netbsd-10.0_RC3-amd64/wheel Successfully built astro_aleph-1.0.0-cp312-cp312-netbsd_10_0_rc3_amd64.whl ===> Installing for py312-astro_aleph-1.0.0 => Generating pre-install file lists => Automatic manual page handling => Generating post-install file lists => Checking file-check results for py312-astro_aleph-1.0.0 => Creating binary package /usr/pkgsrc.2023Q4/pkgsrc_myownpkgs/py-astro-aleph/work/.packages/py312-astro_aleph-1.0.0.tgz ===> Building binary package for py312-astro_aleph-1.0.0 => Creating binary package /tmp/packages/All/py312-astro_aleph-1.0.0.tgz ===> Installing binary package of py312-astro_aleph-1.0.0